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To apply this tool one needs to know at least:
1) underlying language
2) cipher used
3) how to properly transcribe the text
1) here one can try many languages - difficult, but possible. AZdecrypt uses 8-grams, so authors processed terabytes of text collect stats. That's too much for any medieval language, but we probably can downgrade to 6-, 5- or 4-grams, thus needing much less sample texts (VMS is longer than other challenges, so less precise model is acceptable).
2) AZdecrypt is extremely powerful when working with one-to-many ciphers. However Voynich may be abjadic and may contain nulls. Number of possibilities here may grow exponentially
3) almost noone believes that for example "cth" is actually "c"+"t"+"h". So before feeding Voynich text to the tool one needs to do some transformations. A lot of variants to test here.